Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015830272.1_cds_XP_016504109.1_17588
CDS Infomation

[gene=LOC107822120] [db_xref=GeneID:107822120] [protein=probable protein phosphatase 2C 6] [protein_id=XP_016504109.1] [location=join(35269..35532,36744..37121,39428..39545,39661..39884,40321..40872)] [gbkey=CDS]
Sequence

ATGGGAATTTGCTATTCTTTAGTAAAAGGGAAGAGCAGTGAGAATGAAAGTAAAAAGATT
GATTTGAAGTTGAGGAAGAGCAGTTCTAATAATGGAGATTTCAGCACATTTATGAGCAAG
TTGAGTGGAGGAAGTGGAGCTGAGGAGAGAGGACTTGAGCAGATTGAAGGAAGGGTAATT
GGAAATGGTGCTAGTAATGTTGCTTGTTTATATACTCAGCAAGGAAAGAAAGGTACAAAT
CAAGATGCCATGATTGTTTGGGAGAATTATTGTTCGAGAAGCGATACAATCTTTTGTGGA
GTATTTGATGGGCATGGTCCTCATGGTCATATGGTTGCAAGGAAAGTTCGAGATTATCTT
CCACTTTTGCTGCAATCAGAGTGGGAAACTAAATCCTGTGGTGATCAAAATGCTGCATCC
GAGAATGGAAATACTAATGGAGGCTCACATTTTGACGACATTGTGGATGATGATTTGATC
GAATCAGTGGAAGCTGAGAACAATGAAAAATTCCCAGAAATCCATCTGCCACTTAGGAGC
TCAATATTAAAGGCTTTTAGATCAATGGATAAGGAACTAAAGTTACACCCTTCAATAGAC
TGTTTCTGCAGCGGGTCAACTGCTGTTACTTTGGTAATGCAGGGCAAGGATATATTTGTT
GGTAATGTTGGTGACTCAAGAGCAGTTTTGGCAATGAGAGATAAAGACAACTCTTTAATG
GCTGTACAGTTGACAGTAGATTTGAAGCCTAATCTTCCAAGAGAAGCTGCTAGAATCCAG
AAATGTAAAGGACGGGTTTTTGCATTGCAAGATGAGCCGGAGGTTGCACGTGTATGGTTG
CCAAACTGTGACTCTCCAGGTTTGGCAATGGCCAGAGCATTTGGTGATTTTTGTCTCAAG
GATTTTGGTTTAATTTCCGTGCCGGATGTGTATTACCACCACATTACTGAAAGGGATGAG
TTTGTCCTCCTTGCAACTGACGGGGTTTGGGATGTCCTTTCTAATAAGGAAGCTGTTGAT
ATTGTGGCCTCAGCTCCAAGTCGTGAAACAGCTGGCCGAGCTCTTGTTGAGTGTGCTACT
AGAGCATGGAGGCTAAAATATCCAACGTCAAAGAATGACGATTGTGCTGTAGTATGCCTT
TACCTAGACACCACACCTTTACCTGATGTCAAAGTGATAGAGGGCCAAAATAAGCTGACA
AATTCCCCAGAAATGGAAACTGAGAAAAACACTATAGATGGCAATGTTGGAAGATCAGAT
ACTGAAGCTATTTCAACTTCTCAGACCGCTGATTGTGAAGATCTCAGTACTACCAAAGAT
GCCAGTGAGATAGTTCCAGTCGTCGAGTCACAGGAAGAACAACATCTAGATAAAGGTCTT
GGCCAGTCTAAGAGAAGTATAGCTGAGATTCTTTCGACTGCACAAGACGACGAATGGTCA
GCGCTTGAGGGAATTACCAGGGTTAATAGTCTTCTTAGTCTTCCTAGATTCTTGTCTGCT
GATAAAAGATCTACCAGTTGGAGAAAATGGTTATGA

Peptide Sequence

PEP ID

XP_016504109.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 6 [Nicotiana tabacum]
Sequence

MGICYSLVKGKSSENESKKIDLKLRKSSSNNGDFSTFMSKLSGGSGAEERGLEQIEGRVI
GNGASNVACLYTQQGKKGTNQDAMIVWENYCSRSDTIFCGVFDGHGPHGHMVARKVRDYL
PLLLQSEWETKSCGDQNAASENGNTNGGSHFDDIVDDDLIESVEAENNEKFPEIHLPLRS
SILKAFRSMDKELKLHPSIDCFCSGSTAVTLVMQGKDIFVGNVGDSRAVLAMRDKDNSLM
AVQLTVDLKPNLPREAARIQKCKGRVFALQDEPEVARVWLPNCDSPGLAMARAFGDFCLK
DFGLISVPDVYYHHITERDEFVLLATDGVWDVLSNKEAVDIVASAPSRETAGRALVECAT
RAWRLKYPTSKNDDCAVVCLYLDTTPLPDVKVIEGQNKLTNSPEMETEKNTIDGNVGRSD
TEAISTSQTADCEDLSTTKDASEIVPVVESQEEQHLDKGLGQSKRSIAEILSTAQDDEWS
ALEGITRVNSLLSLPRFLSADKRSTSWRKWL

Transcript Sequence

Gene sequence data has not been registered.